How to Install and Uninstall beagle Package on Ubuntu 21.04 (Hirsute Hippo)

Last updated: November 22,2024

1. Install "beagle" package

Please follow the guidance below to install beagle on Ubuntu 21.04 (Hirsute Hippo)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                beagle
            
                    
    
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2. Uninstall "beagle" package

This is a short guide on how to uninstall beagle on Ubuntu 21.04 (Hirsute Hippo):


    
        
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                sudo apt remove
            
                        
                beagle
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the beagle package on Ubuntu 21.04 (Hirsute Hippo)

Package: beagle
Architecture: all
Version: 5.1-200518+dfsg-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 622
Depends: default-jre | java11-runtime, libhtsjdk-java
Suggests: beagle-doc
Filename: pool/universe/b/beagle/beagle_5.1-200518+dfsg-1_all.deb
Size: 303904
MD5sum: b489511d69ce173311fdeb67b587d09c
SHA1: 9ce9049c23340e5a4357884d643e53c5725e3ecb
SHA256: d4d77f27f4c4b1229c7828c2f4d1c20586fdec871479cc7a76ea5c851920631d
SHA512: 9ee4dc6e1f75690f25190bfc2fd0af2c8defa81eec790143d179ac9ad927c990294e252d437a6aa00ff45952a9a27b1d8e6df975988f5a29e4220b1e699a0b41
Homepage: https://faculty.washington.edu/browning/beagle/beagle.html
Description-en: Genotype calling, genotype phasing and imputation of ungenotyped markers
Beagle performs genotype calling, genotype phasing, imputation of ungenotyped
markers, and identity-by-descent segment detection. Genotypic imputation works
on phased haplotypes using a Li and Stephens haplotype frequency model.
Beagle also implements the Refined IBD algorithm for detecting
homozygosity-by-descent (HBD) and identity-by-descent (IBD) segments.
Description-md5: 8c6aa7e55f8f700b70940474b2b5bd74