How to Install and Uninstall bio-vcf Package on Ubuntu 21.04 (Hirsute Hippo)

Last updated: December 23,2024

1. Install "bio-vcf" package

This tutorial shows how to install bio-vcf on Ubuntu 21.04 (Hirsute Hippo)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                bio-vcf
            
                    
    
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2. Uninstall "bio-vcf" package

Please follow the guidance below to uninstall bio-vcf on Ubuntu 21.04 (Hirsute Hippo):


    
        
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                sudo apt remove
            
                        
                bio-vcf
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the bio-vcf package on Ubuntu 21.04 (Hirsute Hippo)

Package: bio-vcf
Architecture: all
Version: 0.9.5-2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 119
Depends: ruby | ruby-interpreter
Filename: pool/universe/b/bio-vcf/bio-vcf_0.9.5-2_all.deb
Size: 25716
MD5sum: e3b803314e5e9e89230567d9767fae32
SHA1: 92a5e8c20eefed4553660e8685f51ed207dea631
SHA256: d5196ba3c9c9291223b4dd6e83f86447d3a3c4f84de42588adec9d4551272a9e
SHA512: aa093a1fd775c433d1ad21e8fa8d4f56b226d20cce4f164e0c0bb57b5048102a9518403451ed11045cb96268dfb5fe8f12fd60df2c577e70806c19f4a9ee6b14
Homepage: https://rubygems.org/gems/bio-vcf/
Description-en: domain specific language (DSL) for processing the VCF format
Bio-vcf provides a domain specific language (DSL) for processing the
VCF format. Record named fields can be queried with regular
expressions, e.g.
.
sample.dp>20 and rec.filter !~ /LowQD/ and rec.tumor.bcount[rec.alt]>4
.
Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf
is not only very fast for genome-wide (WGS) data, it also comes with a
really nice filtering, evaluation and rewrite language and it can
output any type of textual data, including VCF header and contents in
RDF and JSON.
Description-md5: 325080ef3e0e73c817c105e2948ac363
Ruby-Versions: all