How to Install and Uninstall exonerate Package on Ubuntu 21.04 (Hirsute Hippo)

Last updated: November 26,2024

1. Install "exonerate" package

This is a short guide on how to install exonerate on Ubuntu 21.04 (Hirsute Hippo)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                exonerate
            
                    
    
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2. Uninstall "exonerate" package

This tutorial shows how to uninstall exonerate on Ubuntu 21.04 (Hirsute Hippo):


    
        
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                sudo apt remove
            
                        
                exonerate
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the exonerate package on Ubuntu 21.04 (Hirsute Hippo)

Package: exonerate
Architecture: amd64
Version: 2.4.0-5
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 8292
Depends: libc6 (>= 2.29), libglib2.0-0 (>= 2.24.0)
Suggests: wise
Enhances: bioperl-run
Filename: pool/universe/e/exonerate/exonerate_2.4.0-5_amd64.deb
Size: 1608060
MD5sum: 53fbf8eb0877d574b5da1caeafa6e82c
SHA1: faec29e1edd8e15ad67d1ce7e1243a6e2ef869d0
SHA256: 0be09816073f1ef8699eb6f08d3e5eb41ea7a7d17af8b8e6f4f6cbfe4f7b381b
SHA512: 7a1f2589b579600ac9a91dd3ff896632f33b3518560ec272e301274fe58e30913dadd365a8e7b8739e186722267e66f7d9dbe7434f825c08103e592a8c3afa3e
Homepage: https://www.ebi.ac.uk/about/vertebrate-genomics/software/exonerate
Description-en: generic tool for pairwise sequence comparison
Exonerate allows you to align sequences using a many alignment models, using
either exhaustive dynamic programming, or a variety of heuristics. Much of
the functionality of the Wise dynamic programming suite was reimplemented in C
for better efficiency. Exonerate is an intrinsic component of the building of
the Ensembl genome databases, providing similarity scores between RNA and DNA
sequences and thus determining splice variants and coding sequences in
general.
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An In-silico PCR Experiment Simulation System (see the ipcress man page) is
packaged with exonerate.
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This package also comes with a selection of utilities for performing
simple manipulations quickly on fasta files beyond 2Gb
Description-md5: 61984be320e7cae47c75d879b270d329