How to Install and Uninstall gasic-examples Package on Ubuntu 21.04 (Hirsute Hippo)

Last updated: November 26,2024

1. Install "gasic-examples" package

This guide covers the steps necessary to install gasic-examples on Ubuntu 21.04 (Hirsute Hippo)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                gasic-examples
            
                    
    
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2. Uninstall "gasic-examples" package

Please follow the step by step instructions below to uninstall gasic-examples on Ubuntu 21.04 (Hirsute Hippo):


    
        
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                sudo apt remove
            
                        
                gasic-examples
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the gasic-examples package on Ubuntu 21.04 (Hirsute Hippo)

Package: gasic-examples
Architecture: all
Version: 0.0.r19-7
Priority: optional
Section: universe/science
Source: gasic
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 7144
Enhances: gasic
Filename: pool/universe/g/gasic/gasic-examples_0.0.r19-7_all.deb
Size: 7299160
MD5sum: 6f5f69028f2ef0665f327c46eeed2850
SHA1: 52f1f0650d534d4f28b1c0b252f19e479fe71acf
SHA256: bbc6715d16b875e52971b0087d668ab4388962f5703a0b6a6f08f5c022185e47
SHA512: 8000cb7a18f507e08978b59912fdc22d588409cd8db9cd208375537f10529affc4e489c4c1c1d76cecffc3c36c6f4637dc894688b01084cc2430365a79330f9e
Homepage: http://sourceforge.net/projects/gasic/
Description-en: genome abundance similarity correction (example data)
One goal of sequencing based metagenomic analysis is the quantitative
taxonomic assessment of microbial community compositions. However, the
majority of approaches either quantify at low resolution (e.g. at phylum
level) or have severe problems discerning highly similar species. Yet,
accurate quantification on species level is desirable in applications
such as metagenomic diagnostics or community comparison. GASiC is a
method to correct read alignment results for the ambiguities imposed by
similarities of genomes. It has superior performance over existing
methods.
.
This package includes some examples that can be used for testing gasic.
Description-md5: 076b77b0ef161469461cc2951788038d