How to Install and Uninstall grabix Package on Ubuntu 21.04 (Hirsute Hippo)

Last updated: November 22,2024

1. Install "grabix" package

In this section, we are going to explain the necessary steps to install grabix on Ubuntu 21.04 (Hirsute Hippo)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                grabix
            
                    
    
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2. Uninstall "grabix" package

This is a short guide on how to uninstall grabix on Ubuntu 21.04 (Hirsute Hippo):


    
        
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                sudo apt remove
            
                        
                grabix
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the grabix package on Ubuntu 21.04 (Hirsute Hippo)

Package: grabix
Architecture: amd64
Version: 0.1.7-2build1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 56
Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.0), tabix
Filename: pool/universe/g/grabix/grabix_0.1.7-2build1_amd64.deb
Size: 14916
MD5sum: 25b85d051f323d78133073af29626121
SHA1: c8de1243fb9aebc42dae2071abd7583c0e0bf482
SHA256: 008a84b7bcdeb74027f6bc729552fd4e5ecd01191d394671e4614ef81f62fc09
SHA512: f9a0f3897e0764ad6abe77ded285be61dfae50c3df27e054f1bdb3ca5c720c9470e0495f6451c7da8b0d0f1bd5c444da30cbd78dccde5a8c0830d683491b629c
Homepage: https://github.com/arq5x/grabix
Description-en: wee tool for random access into BGZF files
In biomedical research it is increasing practice to study
the genetic basis of disease. This now frequently comprises
the sequencing of human sequences. The output of the machine
however is redundant, and the real sequence is the best
sequence to explain the redundancy. The exchange of data
happens only with compressed files - to huge and redundant
to perform otherwise. One should avoid uncompression whenever
possible.
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grabix leverages the fantastic BGZF library of the samtools
package to provide random access into text files that have
been compressed with bgzip. grabix creates it's own index
(.gbi) of the bgzipped file. Once indexed, one can extract
arbitrary lines from the file with the grab command. Or
choose random lines with the, well, random command.
Description-md5: 0eef255501daa10dd72d7e36a6dc23b6