How to Install and Uninstall kissplice Package on Ubuntu 21.04 (Hirsute Hippo)

Last updated: May 11,2024

1. Install "kissplice" package

Please follow the guidance below to install kissplice on Ubuntu 21.04 (Hirsute Hippo)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                kissplice
            
                    
    
    Copied

2. Uninstall "kissplice" package

This tutorial shows how to uninstall kissplice on Ubuntu 21.04 (Hirsute Hippo):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                kissplice
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the kissplice package on Ubuntu 21.04 (Hirsute Hippo)

Package: kissplice
Architecture: amd64
Version: 2.5.3-3build1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 17033
Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 9), zlib1g (>= 1:1.1.4), python3:any
Filename: pool/universe/k/kissplice/kissplice_2.5.3-3build1_amd64.deb
Size: 4221240
MD5sum: 5958c7dd7e167d879f9d3cf0b35699c4
SHA1: 01e72855ff734177bbadeded347675ceadce6098
SHA256: b6ec211cb3f8bc26a37ddb0b2be175264f81dad8f86746a1a816a2d9945dc89d
SHA512: 35d9193a8bec70f8089965bec1723db867fc6322ce3618b7d83417219ef6bdb45e11d038e6f902577d713cc70c1cfeb09ea082fae8c3b02688105c95579a937d
Homepage: http://kissplice.prabi.fr/
Description-en: Detection of various kinds of polymorphisms in RNA-seq data
KisSplice is a piece of software that enables the analysis of RNA-seq data
with or without a reference genome. It is an exact local transcriptome
assembler that allows one to identify SNPs, indels and alternative splicing
events. It can deal with an arbitrary number of biological conditions, and
will quantify each variant in each condition.
It has been tested on Illumina datasets of up to 1G reads.
Its memory consumption is around 5Gb for 100M reads.
Description-md5: 6d716ae983176c617d58d582ce80f786