How to Install and Uninstall damapper Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 17,2024

1. Install "damapper" package

Please follow the guidelines below to install damapper on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                damapper
            
                    
    
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2. Uninstall "damapper" package

This guide covers the steps necessary to uninstall damapper on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                damapper
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the damapper package on Ubuntu 21.10 (Impish Indri)

Package: damapper
Architecture: amd64
Version: 0.0+git20200322.b2c9d7f-3
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 304
Depends: libc6 (>= 2.29)
Filename: pool/universe/d/damapper/damapper_0.0+git20200322.b2c9d7f-3_amd64.deb
Size: 106532
MD5sum: 7e7f73a0af9ae7aaab4b803be1c19373
SHA1: 039e00f46025fed4699db7402e1351c64ed90014
SHA256: b70080d993285ac15a2dec15a62f14ff5bc5bb632718155532372e2e594dcefd
SHA512: 1f2fbed15ed5569b71464639d6f36107fb9bb89f504e8c82c72630641cc51f11fe689242997cf39818968bb48971fd75da6f7c7c746670849d1aaa0feb14b2f9
Homepage: https://github.com/thegenemyers/DAMAPPER
Description-en: long read to reference genome mapping tool
Recognised as the Damapper Library, this is a long read to reference
genome mapping command line tool.
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For a given reference database 'X' and read block 'Y', damapper produces
the single file 'Y.X.las'. Each output file is sorted in order of the
A-reads, and if a match is a chain of local alignments, then the LA's in
the chain occur in increasing order of A-coordinates.
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HPC.damapper writes a UNIX shell script to the standard output that maps
every read in blocks to of database to a
reference sequence . If is missing then only the single
block is mapped, and if is also missing then all blocks
of the database are mapped.
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This package contains the damapper and HPC.damapper binaries.
Description-md5: f0ca0bb5b5ea8327b792fcfac9dde8ea