How to Install and Uninstall genomethreader Package on Ubuntu 21.10 (Impish Indri)

Last updated: December 23,2024

1. Install "genomethreader" package

Learn how to install genomethreader on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                genomethreader
            
                    
    
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2. Uninstall "genomethreader" package

This guide covers the steps necessary to uninstall genomethreader on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                genomethreader
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the genomethreader package on Ubuntu 21.10 (Impish Indri)

Package: genomethreader
Architecture: amd64
Version: 1.7.3+dfsg-5
Built-Using: vmatch (= 2.3.1+dfsg-4)
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 22419
Depends: libc6 (>= 2.29), libexpat1 (>= 2.0.1), libgenometools0 (>= 1.6.1+ds), liblua5.1-0, zlib1g (>= 1:1.2.3.3)
Filename: pool/universe/g/genomethreader/genomethreader_1.7.3+dfsg-5_amd64.deb
Size: 2063080
MD5sum: 5bd2a6081f759545772fcfcba992af15
SHA1: 423be4e571ac2d0801c3e4ace509e0e0a12ae233
SHA256: 4ee992215d7073e7013ae123bb4b699b65c9b74a52d5a90ba2f605e1887ffc6b
SHA512: dd3c36362b0b88d24fe6b5c1448d618e78d6d0e1e912ae68334a572d6fea0d7d6606f1cea55009a2d19b2e0116ef28709062a2cec18f01305eb99ecde2696ff5
Homepage: http://genomethreader.org
Description-en: software tool to compute gene structure predictions
GenomeThreader is a software tool to compute gene structure predictions.
The gene structure predictions are calculated using a similarity-based
approach where additional cDNA/EST and/or protein sequences are used to
predict gene structures via spliced alignments. GenomeThreader was motivated
by disabling limitations in GeneSeqer, a popular gene prediction program
which is widely used for plant genome annotation.
Description-md5: 10343b593bae7c426badf0d09d241389