How to Install and Uninstall jmodeltest Package on Ubuntu 21.10 (Impish Indri)

Last updated: December 27,2024

1. Install "jmodeltest" package

Please follow the step by step instructions below to install jmodeltest on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                jmodeltest
            
                    
    
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2. Uninstall "jmodeltest" package

Please follow the steps below to uninstall jmodeltest on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                jmodeltest
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the jmodeltest package on Ubuntu 21.10 (Impish Indri)

Package: jmodeltest
Architecture: all
Version: 2.1.10+dfsg-10
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 2680
Depends: alter-sequence-alignment, libmpj-java, libpal-java, java-wrappers, phyml
Filename: pool/universe/j/jmodeltest/jmodeltest_2.1.10+dfsg-10_all.deb
Size: 976532
MD5sum: 0f8240ae0301a72d9a8270a1bb16b445
SHA1: 7ae7598baeb15d76204e0bff5235d0c28980a4ed
SHA256: 047fa2c7840f487a9d7b6fe3947e74ff9d2c33ab773e1a8da16fcb6d0bd43e72
SHA512: aed5809ba814658ddf93d56961427661b3b9253de840f4b472295faaf34fb87206c6a16fd50c05da619c14fdc3a8b7abcf62d50396d78c8e90d45d42d4b9d579
Homepage: https://github.com//ddarriba/jmodeltest2
Description-en: HPC selection of models of nucleotide substitution
jModelTest is a tool to carry out statistical selection of best-fit
models of nucleotide substitution. It implements five different model
selection strategies: hierarchical and dynamical likelihood ratio tests
(hLRT and dLRT), Akaike and Bayesian information criteria (AIC and BIC),
and a decision theory method (DT). It also provides estimates of model
selection uncertainty, parameter importances and model-averaged
parameter estimates, including model-averaged tree topologies.
jModelTest 2 includes High Performance Computing (HPC) capabilities and
additional features like new strategies for tree optimization, model-
averaged phylogenetic trees (both topology and branch length), heuristic
filtering and automatic logging of user activity.
Description-md5: f27877e220ca8710502bc000284112cb