How to Install and Uninstall libfreecontact0v5 Package on Ubuntu 21.10 (Impish Indri)
Last updated: November 26,2024
1. Install "libfreecontact0v5" package
This guide covers the steps necessary to install libfreecontact0v5 on Ubuntu 21.10 (Impish Indri)
$
sudo apt update
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$
sudo apt install
libfreecontact0v5
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2. Uninstall "libfreecontact0v5" package
Please follow the guidelines below to uninstall libfreecontact0v5 on Ubuntu 21.10 (Impish Indri):
$
sudo apt remove
libfreecontact0v5
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$
sudo apt autoclean && sudo apt autoremove
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3. Information about the libfreecontact0v5 package on Ubuntu 21.10 (Impish Indri)
Package: libfreecontact0v5
Architecture: amd64
Version: 1.0.21-9
Multi-Arch: same
Priority: optional
Section: universe/libs
Source: freecontact
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 166
Depends: libblas3 | libblas.so.3, libc6 (>= 2.29), libgcc-s1 (>= 3.3.1), libgfortran5 (>= 8), libgomp1 (>= 6), liblapack3 | liblapack.so.3, libstdc++6 (>= 5.2)
Conflicts: libfreecontact0
Replaces: libfreecontact0
Filename: pool/universe/f/freecontact/libfreecontact0v5_1.0.21-9_amd64.deb
Size: 64044
MD5sum: c8ea0ef901b3fb4a1a9139639c22b366
SHA1: c68723324836787a59adae4b48ffa9d8758e27ca
SHA256: 46dd182b30bcce0b913148fd4a2afcccf152ee76003b478373dd75ea50428624
SHA512: 5c20c586414a2a569c30b3d008026923968d46c56c1609a3fec8ffd3a290fefbd84b22da98b51419ee57c906ee49dbcce0f6b7d5cbbe8db174e9b24278abb34d
Homepage: http://rostlab.org/
Description-en: fast protein contact predictor library
FreeContact is a protein residue contact predictor optimized for speed.
Its input is a multiple sequence alignment. FreeContact can function as an
accelerated drop-in for the published contact predictors
EVfold-mfDCA of DS. Marks (2011) and
PSICOV of D. Jones (2011).
.
FreeContact is accelerated by a combination of vector instructions, multiple
threads, and faster implementation of key parts.
Depending on the alignment, 8-fold or higher speedups are possible.
.
A sufficiently large alignment is required for meaningful results.
As a minimum, an alignment with an effective (after-weighting) sequence count
bigger than the length of the query sequence should be used. Alignments with
tens of thousands of (effective) sequences are considered good input.
.
jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
can be used to generate the alignments, for example.
.
This package contains the shared library implementing freecontact.
Description-md5: 721f2a8d8be3d901ffe188295e29cf54
Architecture: amd64
Version: 1.0.21-9
Multi-Arch: same
Priority: optional
Section: universe/libs
Source: freecontact
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 166
Depends: libblas3 | libblas.so.3, libc6 (>= 2.29), libgcc-s1 (>= 3.3.1), libgfortran5 (>= 8), libgomp1 (>= 6), liblapack3 | liblapack.so.3, libstdc++6 (>= 5.2)
Conflicts: libfreecontact0
Replaces: libfreecontact0
Filename: pool/universe/f/freecontact/libfreecontact0v5_1.0.21-9_amd64.deb
Size: 64044
MD5sum: c8ea0ef901b3fb4a1a9139639c22b366
SHA1: c68723324836787a59adae4b48ffa9d8758e27ca
SHA256: 46dd182b30bcce0b913148fd4a2afcccf152ee76003b478373dd75ea50428624
SHA512: 5c20c586414a2a569c30b3d008026923968d46c56c1609a3fec8ffd3a290fefbd84b22da98b51419ee57c906ee49dbcce0f6b7d5cbbe8db174e9b24278abb34d
Homepage: http://rostlab.org/
Description-en: fast protein contact predictor library
FreeContact is a protein residue contact predictor optimized for speed.
Its input is a multiple sequence alignment. FreeContact can function as an
accelerated drop-in for the published contact predictors
EVfold-mfDCA of DS. Marks (2011) and
PSICOV of D. Jones (2011).
.
FreeContact is accelerated by a combination of vector instructions, multiple
threads, and faster implementation of key parts.
Depending on the alignment, 8-fold or higher speedups are possible.
.
A sufficiently large alignment is required for meaningful results.
As a minimum, an alignment with an effective (after-weighting) sequence count
bigger than the length of the query sequence should be used. Alignments with
tens of thousands of (effective) sequences are considered good input.
.
jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
can be used to generate the alignments, for example.
.
This package contains the shared library implementing freecontact.
Description-md5: 721f2a8d8be3d901ffe188295e29cf54