How to Install and Uninstall libseqlib-dev Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 22,2024

1. Install "libseqlib-dev" package

Please follow the step by step instructions below to install libseqlib-dev on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                libseqlib-dev
            
                    
    
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2. Uninstall "libseqlib-dev" package

Here is a brief guide to show you how to uninstall libseqlib-dev on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                libseqlib-dev
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the libseqlib-dev package on Ubuntu 21.10 (Impish Indri)

Package: libseqlib-dev
Architecture: amd64
Version: 1.2.0+dfsg-4
Multi-Arch: same
Priority: optional
Section: universe/libdevel
Source: libseqlib
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1193
Depends: libseqlib2 (= 1.2.0+dfsg-4), libfml-dev, libhts-dev, libjsoncpp-dev, libssw-dev, zlib1g-dev, libbwa-dev
Filename: pool/universe/libs/libseqlib/libseqlib-dev_1.2.0+dfsg-4_amd64.deb
Size: 208884
MD5sum: 69869126363a414c23e535da9a3aa071
SHA1: ae524715226bea0d26184b5cb835c8794a1bac1c
SHA256: 24ac9f016a8c52b54f41ed9ea5e1a9d2cd9edf1af6aa3809f271607ea5f3a0e1
SHA512: afacbff481954c59576ece55697121ac45df8bb32d06fdb8cc5189c0a52d8f6088668942cfd001cdb2a5ca7315749afc9522397dc83441ccf13893694b88eccb
Homepage: https://github.com/walaj/SeqLib
Description-en: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)
C++ API and command line tool that provides a rapid and user-friendly
interface to BAM/SAM/CRAM files, global sequence alignment operations
and sequence assembly. Four C libraries perform core operations in
SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
and Fermi for error correction and sequence assembly. Benchmarking
indicates that SeqLib has lower CPU and memory requirements than leading
C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
and assemble reads from a CRAM file and then align with BWA-MEM.
SeqLib also provides additional capabilities, including chromosome-aware
interval queries and read plotting. Command line tools are available for
performing integrated error correction, micro-assemblies and alignment.
.
This package contains the header files and static library.
Description-md5: 28b7ac82b2eed617ed6e66b7fee02d12