How to Install and Uninstall mmseqs2 Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 20,2024

1. Install "mmseqs2" package

This is a short guide on how to install mmseqs2 on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                mmseqs2
            
                    
    
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2. Uninstall "mmseqs2" package

This guide covers the steps necessary to uninstall mmseqs2 on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                mmseqs2
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the mmseqs2 package on Ubuntu 21.10 (Impish Indri)

Package: mmseqs2
Architecture: amd64
Version: 13-45111+ds-1
Built-Using: simde (= 0.7.2-4)
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 32772
Depends: libatomic1 (>= 4.8), libbz2-1.0, libc6 (>= 2.33), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libgzstream0 (>= 1.5+dfsg), libstdc++6 (>= 9), zlib1g (>= 1:1.2.6)
Filename: pool/universe/m/mmseqs2/mmseqs2_13-45111+ds-1_amd64.deb
Size: 8196520
MD5sum: 545ff979cbc430e656d1d62fdeb2f459
SHA1: 1f3f8ef74ea90764d6a3b880731b5f758eb55997
SHA256: 3ca119116bf2ee544ce9635d289ee76a92960a2f7264b69961d5035cdc227359
SHA512: de254fa9693ce5416b55da0ec2950c9f75afc0c8ff962fd264a008fa879845c912975b209b895c235ac385200fac2290ba742e7b38c297138269f8b026e1fc0c
Homepage: https://github.com/soedinglab/MMseqs2
Description-en: ultra fast and sensitive protein search and clustering
MMseqs2 (Many-against-Many sequence searching) is a software suite to
search and cluster huge proteins/nucleotide sequence sets. MMseqs2 is
open source GPL-licensed software implemented in C++ for Linux, MacOS,
and (as beta version, via cygwin) Windows. The software is designed to
run on multiple cores and servers and exhibits very good scalability.
MMseqs2 can run 10000 times faster than BLAST. At 100 times its speed it
achieves almost the same sensitivity. It can perform profile searches
with the same sensitivity as PSI-BLAST at over 400 times its speed.
Description-md5: 822197ebd72a66105eb34f923c612ad8