How to Install and Uninstall phast Package on Ubuntu 21.10 (Impish Indri)

Last updated: January 11,2025

1. Install "phast" package

In this section, we are going to explain the necessary steps to install phast on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                phast
            
                    
    
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2. Uninstall "phast" package

Here is a brief guide to show you how to uninstall phast on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                phast
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the phast package on Ubuntu 21.10 (Impish Indri)

Package: phast
Architecture: amd64
Version: 1.5+dfsg-2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 28290
Depends: libc6 (>= 2.29), liblapack3 | liblapack.so.3, libpcre3
Filename: pool/universe/p/phast/phast_1.5+dfsg-2_amd64.deb
Size: 2146200
MD5sum: 199b33325b72d1cce4083040640afab6
SHA1: 4e28387d42527a1ffceea7195c3237d3c2f4ebbe
SHA256: 6116bbbd28b935368830a6e50b02523b433c48526eb9e070d94c7075f49f5677
SHA512: e93596577e007458f979a82c3904cc86ae46121b691241f5713bd8d49e216eddca4c3a34c883c5efee520cc69504c58b6e58acff929a95ab351080d17bdc0b0a
Homepage: http://compgen.cshl.edu/phast/
Description-en: phylogenetic analysis with space/time models
PHAST is a software package for comparative and evolutionary genomics.
It consists of about half a dozen major programs, plus more than a dozen
utilities for manipulating sequence alignments, phylogenetic trees, and
genomic annotations. For the most part, PHAST focuses on two kinds of
applications: the identification of novel functional elements, including
protein-coding exons and evolutionarily conserved sequences; and
statistical phylogenetic modeling, including estimation of model
parameters, detection of signatures of selection, and reconstruction of
ancestral sequences.
.
PHAST does not support phylogeny reconstruction or sequence alignment,
and it is designed for use with DNA sequences only (see Comparison).
Description-md5: 5260b2251e211c62f521fa0303e12a8d