How to Install and Uninstall porechop Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 16,2024

1. Install "porechop" package

Please follow the instructions below to install porechop on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                porechop
            
                    
    
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2. Uninstall "porechop" package

Please follow the guidelines below to uninstall porechop on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                porechop
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the porechop package on Ubuntu 21.10 (Impish Indri)

Package: porechop
Architecture: amd64
Version: 0.2.4+dfsg-2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 237
Depends: python3 (>= 3~), python3:any, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2)
Filename: pool/universe/p/porechop/porechop_0.2.4+dfsg-2_amd64.deb
Size: 55332
MD5sum: 261f9947e0e189115d9ee34dc1302645
SHA1: 83aed76d42639e518ad6a778a7eff9506e8ec4b4
SHA256: 6ff6581c11856767a1b224e6c409b8ec52169e166e22a166d4edd297abe14284
SHA512: 7c0f5aafd167251dcf9cb422d399a96da2c43bc67bafe13e314c115ecf276836af54322fcc5507687f65a9db2a503cfaf06a3cac774c793518076ba3f8b410c9
Homepage: https://rrwick.github.io/Porechop
Description-en: adapter trimmer for Oxford Nanopore reads
Porechop is a tool for finding and removing adapters from Oxford
Nanopore reads. Adapters on the ends of reads are trimmed off, and
when a read has an adapter in its middle, it is treated as chimeric
and chopped into separate reads. Porechop performs thorough
alignments to effectively find adapters, even at low sequence
identity.
Porechop also supports demultiplexing of Nanopore reads that were
barcoded with the Native Barcoding Kit, PCR Barcoding Kit or Rapid
Barcoding Kit.
Description-md5: 20929de408e0539a22c85849de88c073