Complete Guide: Installing pplacer on Ubuntu 21.10 (Impish Indri) 2024

1. Install "pplacer" package

This tutorial shows how to install pplacer on Ubuntu 21.10 (Impish Indri)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                pplacer
            
                    
    
    Copied

2. Uninstall "pplacer" package

Here is a brief guide to show you how to uninstall pplacer on Ubuntu 21.10 (Impish Indri):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                pplacer
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the pplacer package on Ubuntu 21.10 (Impish Indri)

Package: pplacer
Architecture: amd64
Version: 1.1~alpha19-4
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 18011
Depends: libc6 (>= 2.32), libgsl25 (>= 2.6), libsqlite3-0 (>= 3.25.0), zlib1g (>= 1:1.1.4)
Filename: pool/universe/p/pplacer/pplacer_1.1~alpha19-4_amd64.deb
Size: 2942416
MD5sum: a781bcf747890a61ad0985b4d05b7ed0
SHA1: fd912a9430522f5b67abb9a582965a92ea2b3816
SHA256: 9af32b948a6a25af3d6daa64fb0773611c7af6ada72a9481d30960b387f970c2
SHA512: 076b1e822605d86fa6286bbb66bf7a465ea18f6fe4dfe58b31114f42f33ca1a1b1b33d058a5b993c83622ffc23e1af1f45a9fe35dcd920bcb7bd4f5f4249e796
Homepage: https://github.com/matsen/pplacer
Description-en: phylogenetic placement and downstream analysis
Pplacer places reads on a phylogenetic tree. guppy (Grand Unified
Phylogenetic Placement Yanalyzer) yanalyzes them. rppr is a helpful tool
for working with reference packages.
.
Pplacer places query sequences on a fixed reference phylogenetic tree to
maximize phylogenetic likelihood or posterior probability according to a
reference alignment. Pplacer is designed to be fast, to give useful
information about uncertainty, and to offer advanced visualization and
downstream analysis.
Description-md5: b2b7dbc06a8fe255205980648d76b102