How to Install and Uninstall proalign Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 20,2024

1. Install "proalign" package

Please follow the instructions below to install proalign on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                proalign
            
                    
    
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2. Uninstall "proalign" package

Please follow the steps below to uninstall proalign on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                proalign
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the proalign package on Ubuntu 21.10 (Impish Indri)

Package: proalign
Architecture: amd64
Version: 0.603-5
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 182
Depends: default-jre
Filename: pool/universe/p/proalign/proalign_0.603-5_amd64.deb
Size: 166236
MD5sum: 030e014c7a66ff54e753deaa0681736d
SHA1: c1118011cdf9750ff2c584bca02f8c3087249154
SHA256: d9710f89d65fc773fe44e047f7b14114ccb76f10695d5884ce0d2d7b0df6f4c0
SHA512: 315743441de5c9d9f7101886b3868fc72a472d04f60f016672fa0c52e853aeea21551706a0cc4345fed129cfb1c1d9e06b01bc2056a7f0694066bd80b48f3b6e
Homepage: http://loytynojalab.biocenter.helsinki.fi/software/proalign/
Description-en: Probabilistic multiple alignment program
ProAlign performs probabilistic sequence alignments using hidden Markov
models (HMM). It includes a graphical interface (GUI) allowing to (i)
perform alignments of nucleotide or amino-acid sequences, (ii) view the
quality of solutions, (iii) filter the unreliable alignment regions and
(iv) export alignments to other software.
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ProAlign uses a progressive method, such that multiple alignment is
created stepwise by performing pairwise alignments in the nodes of a
guide tree. Sequences are described with vectors of character
probabilities, and each pairwise alignment reconstructs the ancestral
(parent) sequence by computing the probabilities of different
characters according to an evolutionary model.
Description-md5: 9ec8280b5e64401439cf90623a4b0d2b