How to Install and Uninstall python-pairix-examples Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 07,2024

1. Install "python-pairix-examples" package

Please follow the instructions below to install python-pairix-examples on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                python-pairix-examples
            
                    
    
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2. Uninstall "python-pairix-examples" package

This guide let you learn how to uninstall python-pairix-examples on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                python-pairix-examples
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the python-pairix-examples package on Ubuntu 21.10 (Impish Indri)

Package: python-pairix-examples
Architecture: all
Version: 0.3.7-3build1
Priority: optional
Section: universe/science
Source: python-pairix
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 169774
Enhances: python3-pairix
Filename: pool/universe/p/python-pairix/python-pairix-examples_0.3.7-3build1_all.deb
Size: 173841964
MD5sum: 76a791a5b9d816351190376ddcad605e
SHA1: c9ae3fa9afbcb6bf722d70227ba2017332e2821a
SHA256: 595f0616e630af8ed363f36b99526239966e35b239ed98363a36aa72f12b293b
SHA512: a6266c8db6262b68e25bc90b65ea6e4f4583c22f69ebac83e8063b83508ebbf77548d6822bc9e63ccea678c3794bbf5dcbaa33d06bf7c4920d2aa242f244d50b
Homepage: https://github.com/4dn-dcic/pairix
Description-en: 1D/2D indexing and querying with a pair of genomic coordinates (examples)
Pairix is a tool for indexing and querying on a block-compressed text
file containing pairs of genomic coordinates.
.
Pairix is a stand-alone C program that was written on top of tabix as a
tool for the 4DN-standard pairs file format describing Hi-C data:
pairs_format_specification.md
.
However, Pairix can be used as a generic tool for indexing and querying
any bgzipped text file containing genomic coordinates, for either 2D- or
1D- indexing and querying.
.
For example: given the custom text file below, you want to extract
specific lines from the Pairs file further below. An awk command would
read the Pairs file from beginning to end. Pairix creates an index and
uses it to access the file from a relevant position by taking advantage
of bgzf compression, allowing for a fast query on large files.
.
This package contains some example data to test the package.
Description-md5: 5bfd75148bd6210b6a04d9db503a008a