How to Install and Uninstall python3-cyvcf2 Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 17,2024

1. Install "python3-cyvcf2" package

Please follow the steps below to install python3-cyvcf2 on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                python3-cyvcf2
            
                    
    
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2. Uninstall "python3-cyvcf2" package

Learn how to uninstall python3-cyvcf2 on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                python3-cyvcf2
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the python3-cyvcf2 package on Ubuntu 21.10 (Impish Indri)

Package: python3-cyvcf2
Architecture: amd64
Version: 0.30.4-4
Priority: optional
Section: universe/python
Source: cyvcf2
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 4759
Depends: python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9, python3 (<< 3.10), python3 (>= 3.9~), python3-click, python3-coloredlogs, python3:any, libc6 (>= 2.14), libhts3 (>= 1.10)
Filename: pool/universe/c/cyvcf2/python3-cyvcf2_0.30.4-4_amd64.deb
Size: 805184
MD5sum: 736741b85b5b7ffd0f7cd4a5c6a37969
SHA1: 897031f6f275609f8598729172d01a96688aa037
SHA256: 6c62a4c01fb2ed0a56f2e3b34bb888d512f8e6c490397ee5d1bbc649dd3e4914
SHA512: 631858c51ee29b8cebcda8ba22ddc0db367d7c5d1a44b148c54402038094e888e3c5f8f36f95b94ce66101dd930b43f065fad1ed2687e4e2b5a0a4492e4993d8
Homepage: https://github.com/brentp/cyvcf2
Description-en: VCF parser based on htslib (Python 3)
This modules allows fast parsing of VCF and BCF including region-queries
with Python. This is essential for efficient analyses of nucleotide
variation with Python on high-throughput sequencing data.
.
cyvcf2 is a cython wrapper around htslib. Attributes like
variant.gt_ref_depths return a numpy array directly so they are
immediately ready for downstream use.
.
This package installs the library for Python 3.
Description-md5: 67a29a49a39da035177e5b87de6b1a3e