How to Install and Uninstall python3-nanomath Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 22,2024

1. Install "python3-nanomath" package

Please follow the guidance below to install python3-nanomath on Ubuntu 21.10 (Impish Indri)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                python3-nanomath
            
                    
    
    Copied

2. Uninstall "python3-nanomath" package

In this section, we are going to explain the necessary steps to uninstall python3-nanomath on Ubuntu 21.10 (Impish Indri):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                python3-nanomath
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the python3-nanomath package on Ubuntu 21.10 (Impish Indri)

Package: python3-nanomath
Architecture: all
Version: 1.2.0+ds-1
Priority: optional
Section: universe/python
Source: python-nanomath
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 38
Depends: python3-numpy, python3-pandas, python3:any, python3-deprecated
Filename: pool/universe/p/python-nanomath/python3-nanomath_1.2.0+ds-1_all.deb
Size: 8060
MD5sum: 558a705ccd5c678034c598036e414f53
SHA1: 2ff42d897003838eb6d0b1347025ee4de6e86463
SHA256: 5bab95bff9244fb13f3cf7cdc6058d318e31a22a9cfaf31ac6623bd23296c747
SHA512: 484696b8d3122204fd119187b098d65d01815be1f454ac640183ac667d7e4f53b916ca1b3b59fa18f6f67dfa9d9ab4b3635b0de0284f32c33b4a97aae28acb9e
Homepage: https://github.com/wdecoster/nanomath
Description-en: simple math function for other Oxford Nanopore processing scripts
This Python3 module provides a few simple math and statistics functions for
other scripts processing Oxford Nanopore sequencing data.
.
* Calculate read N50 from a set of lengths get_N50(readlenghts)
* Remove extreme length outliers from a dataset
remove_length_outliers(dataframe, columname)
* Calculate the average Phred quality of a read ave_qual(qualscores)
* Write out the statistics report after calling readstats function
write_stats(dataframe, outputname)
* Compute a number of statistics, return a dictionary
calc_read_stats(dataframe)
Description-md5: bda351d07aabc939444c7273046b02b5