How to Install and Uninstall python3-pauvre Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 18,2024

1. Install "python3-pauvre" package

Please follow the step by step instructions below to install python3-pauvre on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                python3-pauvre
            
                    
    
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2. Uninstall "python3-pauvre" package

Please follow the step by step instructions below to uninstall python3-pauvre on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                python3-pauvre
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the python3-pauvre package on Ubuntu 21.10 (Impish Indri)

Package: python3-pauvre
Architecture: all
Version: 0.2.2-2
Priority: optional
Section: universe/python
Source: python-pauvre
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 279
Depends: python3-biopython, python3-matplotlib, python3-numpy, python3-pandas, python3-scipy, python3-sklearn, python3:any, python3-tk
Filename: pool/universe/p/python-pauvre/python3-pauvre_0.2.2-2_all.deb
Size: 51212
MD5sum: 641d740e1c96ace2e9a36aac3d671481
SHA1: 82fb9e4bbf10844e09e9d56d8c576013d1d14423
SHA256: 9ad1da8da5307836481d221094bd39dd3269ff7bb308c3ba10a07be74a222d59
SHA512: 39e6dff6ce5c20bac7f109dcc27bc5a8fc13177a16e27e640aae65bd4eedcb5b179d53dfa50b257ea0d62e7630620ec15ddc59f08b5799ecf0092f20d0ea8032
Homepage: https://github.com/conchoecia/pauvre
Description-en: QC and genome browser plotting Oxford Nanopore and PacBio long reads
Pauvre is a plotting package designed for nanopore and PacBio long reads.
.
This package currently hosts four scripts for plotting and/or printing stats.
.
pauvre marginplot
Takes a fastq file as input and outputs a marginal histogram with a
heatmap.
pauvre stats
Takes a fastq file as input and prints out a table of stats, including
how many basepairs/reads there are for a length/mean quality cutoff.
This is also automagically called when using pauvre marginplot
pauvre redwood
Method of representing circular genomes. A redwood plot contains long
reads as "rings" on the inside, a gene annotation "cambrium/phloem",
and a RNAseq "bark". The input is .bam files for the long reads and
RNAseq data, and a .gff file for the annotation.
pauvre synteny
Makes a synteny plot of circular genomes. Finds the most parsimonius
rotation to display the synteny of all the input genomes with the
fewest crossings-over. Input is one .gff file per circular genome
and one directory of gene alignments.
Description-md5: 044374d35e11fcf7d5cd7d2650a77a0b