How to Install and Uninstall python3-presto Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 17,2024

1. Install "python3-presto" package

In this section, we are going to explain the necessary steps to install python3-presto on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                python3-presto
            
                    
    
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2. Uninstall "python3-presto" package

This guide covers the steps necessary to uninstall python3-presto on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                python3-presto
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the python3-presto package on Ubuntu 21.10 (Impish Indri)

Package: python3-presto
Architecture: all
Version: 0.6.2-1
Priority: optional
Section: universe/python
Source: presto
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 222
Depends: python3-biopython (>= 1.65), python3-numpy, python3-pandas (>= 0.15), python3-scipy, python3:any
Filename: pool/universe/p/presto/python3-presto_0.6.2-1_all.deb
Size: 44208
MD5sum: 11f78d979ca72629573e3d92dd213249
SHA1: 43bbb78870807eec80c94ecb77203a377a891e39
SHA256: 64efaaf92be11671fc9c34a80944f09963d64f7506725e95cbe0fbbef3a4d9c3
SHA512: c12d81658f3e02cee7a942e31baa9c57e015e55d7b3dbcac734f476d8a0a37c0df13162d4b4b39b13f88f2423b20799ecf38170f8b34b2fd4d313b918de78757
Homepage: https://presto.readthedocs.io
Description-en: toolkit for processing B and T cell sequences (Python3 module)
pRESTO is a toolkit for processing raw reads from high-throughput
sequencing of B cell and T cell repertoires.
.
Dramatic improvements in high-throughput sequencing technologies now
enable large-scale characterization of lymphocyte repertoires, defined
as the collection of trans-membrane antigen-receptor proteins located on
the surface of B cells and T cells. The REpertoire Sequencing TOolkit
(pRESTO) is composed of a suite of utilities to handle all stages
of sequence processing prior to germline segment assignment. pRESTO
is designed to handle either single reads or paired-end reads. It
includes features for quality control, primer masking, annotation of
reads with sequence embedded barcodes, generation of unique molecular
identifier (UMI) consensus sequences, assembly of paired-end reads and
identification of duplicate sequences. Numerous options for sequence
sorting, sampling and conversion operations are also included.
.
This package provides the presto Python3 module.
Description-md5: 271f58a0231dc24576d9922b8c766c1c