How to Install and Uninstall r-bioc-ballgown Package on Ubuntu 21.10 (Impish Indri)

Last updated: December 24,2024

1. Install "r-bioc-ballgown" package

In this section, we are going to explain the necessary steps to install r-bioc-ballgown on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-ballgown
            
                    
    
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2. Uninstall "r-bioc-ballgown" package

Please follow the instructions below to uninstall r-bioc-ballgown on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                r-bioc-ballgown
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-ballgown package on Ubuntu 21.10 (Impish Indri)

Package: r-bioc-ballgown
Architecture: all
Version: 2.22.0+dfsg-2
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 4504
Depends: r-base-core (>= 4.0.4-1build1), r-api-4.0, r-api-bioc-3.12, r-bioc-genomicranges (>= 1.17.25), r-bioc-iranges (>= 1.99.22), r-bioc-s4vectors (>= 0.9.39), r-cran-rcolorbrewer, r-bioc-sva, r-bioc-limma, r-bioc-rtracklayer (>= 1.29.25), r-bioc-biobase (>= 2.25.0), r-bioc-genomeinfodb
Recommends: r-cran-testthat
Suggests: r-cran-knitr
Filename: pool/universe/r/r-bioc-ballgown/r-bioc-ballgown_2.22.0+dfsg-2_all.deb
Size: 2914512
MD5sum: 88b74b33fcbae374cf9b5d6bd4b9d0cd
SHA1: 595b7ead30bd6157e7b6347ab63a24b122c8c083
SHA256: f47f933b129ab0c07c4054373019122ad3698077160429e6b8e98d611d433b03
SHA512: 58507c0c6177a9ce86f4a5047e0f8fc79652a00775564f5d6b046f52e18795a5e0ca595919f058c1ef5fc1930fbb81357eecd2f85e60d384bdd8e93f9cacca52
Homepage: https://bioconductor.org/packages/ballgown/
Description-en: Flexible, isoform-level differential expression analysis
Tools for statistical analysis of assembled transcriptomes,
including flexible differential expression analysis, visualization of
transcript structures, and matching of assembled transcripts to annotation.
Description-md5: f4ae5d7c8c9bcfa4c48b5e78d093a9f0