How to Install and Uninstall r-cran-bios2cor Package on Ubuntu 21.10 (Impish Indri)

Last updated: September 20,2024

1. Install "r-cran-bios2cor" package

This guide let you learn how to install r-cran-bios2cor on Ubuntu 21.10 (Impish Indri)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-cran-bios2cor
            
                    
    
    Copied

2. Uninstall "r-cran-bios2cor" package

Please follow the steps below to uninstall r-cran-bios2cor on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                r-cran-bios2cor
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the r-cran-bios2cor package on Ubuntu 21.10 (Impish Indri)

Package: r-cran-bios2cor
Architecture: all
Version: 2.2-2
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1402
Depends: r-base-core (>= 4.0.2-1build1), r-api-4.0, r-cran-bio3d, r-cran-circular, r-cran-bigmemory, r-cran-igraph
Filename: pool/universe/r/r-cran-bios2cor/r-cran-bios2cor_2.2-2_all.deb
Size: 692120
MD5sum: fed70d3c8ff0e6284c95d394dd3bfa45
SHA1: a44a417ceac0b49ca80ccdce21440cd98dd2c181
SHA256: 2a11d4091b1701b8dae3819ce03ce281a5774bf50764459bee208a9b6bd35edd
SHA512: 56236e972f2d21b7df96251aebdf36ee1e0489b6cac1a83dc759abc617674477dce9f4b5dfbe22bcc9ece31b552d0b3e13835ad6db4128796f0b7fa54781df94
Homepage: https://cran.r-project.org/package=Bios2cor
Description-en: GNU R from Biological Sequences and Simulations to Correlation
Analysis Utilities for computation and analysis of
correlation/covariation in multiple sequence alignments and in
side chain motions during molecular dynamics simulations. Features
include the computation of correlation/covariation scores using a
variety of scoring functions between either sequence positions in
alignments or side chain dihedral angles in molecular dynamics
simulations and utilities to analyze the correlation/covariation
matrix through a variety of tools including network representation
and principal components analysis. In addition, several utility
functions are based on the R graphical environment to provide
friendly tools for help in data interpretation. Examples of
sequence covariation analysis are provided in: (1) Pele J, Moreau
M, Abdi H, Rodien P, Castel H, Chabbert M (2014)
and (2) Taddese B, Deniaud M, Garnier A,
Tiss A, Guissouma H, Abdi H, Henrion D, Chabbert M (2018) 10.1371/journal.pcbi.1006209>. An example of side chain correlated
motion analysis is provided in: Taddese B, Garnier A, Abdi H,
Henrion D, Chabbert M (2020) 1>. This work was supported by the French National Research
Agency (Grant number: ANR-11-BSV2-026) and by GENCI (Grant
number: 100567).
Description-md5: 10485229e65564a9eee652af9ea00957