Complete Guide: Installing svim on Ubuntu 21.10 (Impish Indri) 2024

1. Install "svim" package

In this section, we are going to explain the necessary steps to install svim on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                svim
            
                    
    
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2. Uninstall "svim" package

Learn how to uninstall svim on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                svim
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the svim package on Ubuntu 21.10 (Impish Indri)

Package: svim
Architecture: all
Version: 1.4.2+ds-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 236
Depends: python3-matplotlib, python3-numpy, python3-pysam, python3-scipy, python3:any
Filename: pool/universe/s/svim/svim_1.4.2+ds-1_all.deb
Size: 31036
MD5sum: 2efafe39a0cf9321a6ec6600ba9f190a
SHA1: ba891fdad8004290e88c1288aff8d9b6a11905b4
SHA256: 7f7f1c16c1958b0f8cdce89f993fe84e581558a6b65c03cfa77cdcd525938237
SHA512: 222d16735085205bda75062d69c4a294eafc782a4c5c5fe6c02786d03706acf74c320186bb320f2250828716cb235203a217051c2d62d435a19288f60a29116e
Homepage: https://github.com/eldariont/svim
Description-en: Structural variant caller for long sequencing reads
SVIM is a structural variant caller for long sequencing reads.
It is able to detect, classify and genotype five different
classes of structural variants. Unlike existing methods, SVIM
integrates information from across the genome to precisely
distinguish similar events, such as tandem and interspersed
duplications and simple insertions.
Description-md5: 87b9d59e1f74612750f42ac74ed9993c