How to Install and Uninstall swarm Package on Ubuntu 21.10 (Impish Indri)

Last updated: April 29,2024

1. Install "swarm" package

Please follow the steps below to install swarm on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                swarm
            
                    
    
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2. Uninstall "swarm" package

This is a short guide on how to uninstall swarm on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                swarm
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the swarm package on Ubuntu 21.10 (Impish Indri)

Package: swarm
Architecture: amd64
Version: 3.0.0+dfsg-2build1
Priority: optional
Section: universe/science
Source: swarm-cluster
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 726
Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 4.1.1)
Recommends: python3
Filename: pool/universe/s/swarm-cluster/swarm_3.0.0+dfsg-2build1_amd64.deb
Size: 620376
MD5sum: d86fa6c640e7349086814cbd91a604c1
SHA1: 4be2dbaabfea6faa88cd861df09571545d0cb285
SHA256: 883aca2747ca3cd422e149b605dafae461b6be9f3bc4a98f7b433ada4367249b
SHA512: 4082e441a5e28baf0978e5bb2d4f66f2e867171753cee8b2ffa6dcf7d5d669d0b9d8b31ff2baf4c5d6a41944a03967a7fb5bf43e98ba2d9d89d0830016b2fe5a
Homepage: https://github.com/torognes/swarm
Description-en: robust and fast clustering method for amplicon-based studies
The purpose of swarm is to provide a novel clustering algorithm to handle large
sets of amplicons. Traditional clustering algorithms results are strongly
input-order dependent, and rely on an arbitrary global clustering threshold.
swarm results are resilient to input-order changes and rely on a small local
linking threshold d, the maximum number of differences between two amplicons.
swarm forms stable high-resolution clusters, with a high yield of biological
information.
Description-md5: 20655f5d65101df022fdc3f06e912b67