How to Install and Uninstall trnascan-se-common Package on Ubuntu 21.10 (Impish Indri)

Last updated: February 24,2025

1. Install "trnascan-se-common" package

Here is a brief guide to show you how to install trnascan-se-common on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                trnascan-se-common
            
                    
    
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2. Uninstall "trnascan-se-common" package

This tutorial shows how to uninstall trnascan-se-common on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                trnascan-se-common
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the trnascan-se-common package on Ubuntu 21.10 (Impish Indri)

Package: trnascan-se-common
Architecture: all
Version: 2.0.7+ds-1
Priority: optional
Section: multiverse/science
Source: trnascan-se
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 17859
Filename: pool/multiverse/t/trnascan-se/trnascan-se-common_2.0.7+ds-1_all.deb
Size: 2341872
MD5sum: 819a99456bd1a7d803a45fe370eded96
SHA1: 21549da30ce9f8589cad1876768b13526d81c32b
SHA256: 5915173efb18407b54fd99077e87acc900792ac2503614dc5fd0dbbb5ad42253
SHA512: e749beaa2b1f0a04551ce031e33d1db82bf9010a822b82678983684db72c7763b5c87ff10e5f46cc6844407b9945d618837f6b212d778b02cfe012c34f0d87ec
Homepage: http://lowelab.ucsc.edu/tRNAscan-SE
Description-en: detection of transfer RNA genes in genomic sequence (common files)
tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence while
giving less than one false positive per 15 gigabases. Two previously described
tRNA detection programs are used as fast, first-pass prefilters to identify
candidate tRNAs, which are then analyzed by a highly selective tRNA covariance
model. This work represents a practical application of RNA covariance models,
which are general, probabilistic secondary structure profiles based on
stochastic context-free grammars. tRNAscan-SE searches at ~ 30 000 bp/s.
Additional extensions to tRNAscan-SE detect unusual tRNA homologues such as
selenocysteine tRNAs, tRNA-derived repetitive elements and tRNA pseudogenes.
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This package contains the architecture-independent common files.
Description-md5: baf47d3860e680ffd09785a074a4c7d1