How to Install and Uninstall snpeff Package on Ubuntu 22.04 LTS (Jammy Jellyfish)

Last updated: November 22,2024

You can also install and uninstall the snpeff on the following distributions in the same way, as they are all based on the Ubuntu system

Kubuntu 22.04 LTS
Lubuntu 22.04 LTS
Xubuntu 22.04 LTS
Ubuntu MATE 22.04 LTS
Ubuntu Studio 22.04 LTS
Pop!_OS 22.04 LTS
Zorin OS 16 / Zorin OS 17
Ubuntu Budgie 22.04

1. Install "snpeff" package

Here is a brief guide to show you how to install snpeff on Ubuntu 22.04 LTS (Jammy Jellyfish)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                snpeff
            
                    
    
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2. Uninstall "snpeff" package

Please follow the step by step instructions below to uninstall snpeff on Ubuntu 22.04 LTS (Jammy Jellyfish):


    
        
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                sudo apt remove
            
                        
                snpeff
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the snpeff package on Ubuntu 22.04 LTS (Jammy Jellyfish)

Package: snpeff
Architecture: all
Version: 5.1+dfsg-2
Priority: optional
Section: universe/java
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 20
Depends: default-jre, libsnpeff-java (= 5.1+dfsg-2)
Suggests: vcfanno
Filename: pool/universe/s/snpeff/snpeff_5.1+dfsg-2_all.deb
Size: 5854
MD5sum: 3cdb8a48805aca61e8d52d3c28749eec
SHA1: b3762f77f9828d7fefebb910bba202f0cfca9505
SHA256: 3a613389495adc9e3230f85aec95850ca6397cc86ef25422792b6057977b9489
SHA512: 96ad3e0a0ed8e3aba8331ea9349eb4115a21a9c529045bce6801532873ec2f05f66a481bf93d95775081c13c3fed5b530290c3c1e0b403417a1c3c173834fbca
Homepage: https://pcingola.github.io/SnpEff/
Description: genetic variant annotation and effect prediction toolbox - tool
Description-md5: 11554ad652b85830dc017ab4d21c9b35