How to Install and Uninstall giira Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: December 29,2024

1. Install "giira" package

Please follow the guidelines below to install giira on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                giira
            
                    
    
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2. Uninstall "giira" package

Please follow the instructions below to uninstall giira on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                giira
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the giira package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: giira
Priority: optional
Section: universe/science
Installed-Size: 195
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 0.0.20140210-2
Depends: libglpk-java, glpk-utils, bowtie2, tophat
Filename: pool/universe/g/giira/giira_0.0.20140210-2_amd64.deb
Size: 140906
MD5sum: fff134bf891d3c2cf2ffea687df5df45
SHA1: e86e10eb69fd6f5a26b20125940e214e725902d1
SHA256: 888aacea0278518ef054d6866ef7d1441df8bee997f127b16edcc4b422c78f33
Description-en: RNA-Seq driven gene finding incorporating ambiguous reads
GIIRA is a gene prediction method that identifies potential coding
regions exclusively based on the mapping of reads from an RNA-Seq
experiment. It was foremost designed for prokaryotic gene prediction
and is able to resolve genes within the expressed region of an operon.
However, it is also applicable to eukaryotes and predicts exon intron
structures as well as alternative isoforms.
Description-md5: fe32b306b33295106f0daeaebd261326
Homepage: http://sourceforge.net/projects/giira/
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu