How to Install and Uninstall igv Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: May 07,2024

1. Install "igv" package

This guide let you learn how to install igv on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                igv
            
                    
    
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2. Uninstall "igv" package

This guide covers the steps necessary to uninstall igv on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                igv
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the igv package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: igv
Priority: optional
Section: multiverse/science
Installed-Size: 16829
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: all
Version: 2.3.68+dfsg-1
Depends: junit4, libbatik-java, libbcprov-java, libcofoja-java, libcommons-io-java, libcommons-logging-java, libcommons-math-java, libcommons-net-java, libconcurrent-java, libguava-java, libhttpclient-java, libhttpcore-java, libjama-java, libjargs-java, libjaxp1.3-java, libjcommon-java, libjfreechart-java, libjgrapht0.8-java, libjhdf5-java, libjide-oss-java, libjlibeps-java, liblog4j1.2-java, libsam-java, libswing-layout-java, libxml-commons-external-java
Filename: pool/multiverse/i/igv/igv_2.3.68+dfsg-1_all.deb
Size: 15889758
MD5sum: 729b8bf1e0ef29f91a4627b2e40c4670
SHA1: db7746dea6dd216357c5ffdcfd1d2ed8833b174b
SHA256: 4a8334f6def0c663b4b5af62715cf1741b6a7f22265a2c919054e34c65536de8
Description-en: Integrative Genomics Viewer
The Integrative Genomics Viewer (IGV) is a high-performance viewer that
efficiently handles large heterogeneous data sets, while providing a
smooth and intuitive user experience at all levels of genome resolution.
A key characteristic of IGV is its focus on the integrative nature of
genomic studies, with support for both array-based and next-generation
sequencing data, and the integration of clinical and phenotypic data.
Although IGV is often used to view genomic data from public sources,
its primary emphasis is to support researchers who wish to visualize and
explore their own data sets or those from colleagues. To that end, IGV
supports flexible loading of local and remote data sets, and is
optimized to provide high-performance data visualization and exploration
on standard desktop systems.
Description-md5: c007bd50ee1f6b5e2ff534544a24c883
Homepage: http://www.broadinstitute.org/igv/
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu