How to Install and Uninstall prime-phylo Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: May 06,2024

1. Install "prime-phylo" package

Here is a brief guide to show you how to install prime-phylo on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                prime-phylo
            
                    
    
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2. Uninstall "prime-phylo" package

This tutorial shows how to uninstall prime-phylo on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                prime-phylo
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the prime-phylo package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: prime-phylo
Priority: optional
Section: universe/science
Installed-Size: 3325
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 1.0.11-2build2
Depends: perl, libblas3 | libblas.so.3, libboost-mpi1.58.0, libboost-serialization1.58.0, libc6 (>= 2.14), libgcc1 (>= 1:4.0), liblapack3 | liblapack.so.3, libopenmpi1.10, libstdc++6 (>= 5.2), libxml2 (>= 2.7.4)
Suggests: njplot, treeviewx, muscle, probalign, mafft, python-biopython, mrbayes, phyml, raxml
Filename: pool/universe/p/prime-phylo/prime-phylo_1.0.11-2build2_amd64.deb
Size: 854304
MD5sum: 823b5eda8c3ecb1a2e1c165f0461ebf2
SHA1: 6c640b98d645364639347b1027c41ded0c8832ac
SHA256: 1cfc6b51551a559cf0e331ba3b81ebafcd5ee52998a97f36f8381c1602fa3b89
Description-en: bayesian estimation of gene trees taking the species tree into account
PrIME (Probabilistic Integrated Models of Evolution) is a package
supporting inference of evolutionary parameters in a Bayesian framework
using Markov chain Monte Carlo simulation. A distinguishing feature of
PrIME is that the species tree is taken into account when analyzing gene
trees.
.
The input data to PrIME is a multiple sequence alignment in FASTA format
and the output data contains trees in Newick format.
Description-md5: d1248884237c1baa3cb1e6264fb39885
Homepage: http://prime.sbc.su.se
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu