How to Install and Uninstall probalign Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: December 23,2024

1. Install "probalign" package

Learn how to install probalign on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                probalign
            
                    
    
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2. Uninstall "probalign" package

Here is a brief guide to show you how to uninstall probalign on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                probalign
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the probalign package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: probalign
Priority: optional
Section: universe/science
Installed-Size: 176
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 1.4-4
Depends: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2)
Filename: pool/universe/p/probalign/probalign_1.4-4_amd64.deb
Size: 67608
MD5sum: 75773e2dfb336477c4e89c8b175f6524
SHA1: d16438527e889712b913b0f9769c14a61b1fe754
SHA256: c5146b0840898ee5149d8b27e689457a8fa03e42a530cf91116dc7b36c4e0c50
Description-en: multiple sequence alignment using partition function posterior probabilities
Probalign uses partition function posterior probability estimates to
compute maximum expected accuracy multiple sequence alignments. It
performs statistically significantly better than the leading alignment
programs Probcons v1.1, MAFFT v5.851, and MUSCLE v3.6 on BAliBASE 3.0,
HOMSTRAD, and OXBENCH benchmarks. Probalign improvements are largest on
datasets containing N/C terminal extensions and on datasets with long
and heterogeneous length sequences. On heteregeneous length datasets
containing repeats Probalign alignment accuracy is 10% and 15% higher
than the other three methods when standard deviation of length is at
least 300 and 400.
Description-md5: 3a11d1cc47a7d13a0473a4a4d2ff5aca
Homepage: http://cs.njit.edu/usman/probalign/
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu