How to Install and Uninstall python-pbgenomicconsensus Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: November 26,2024

1. Install "python-pbgenomicconsensus" package

This tutorial shows how to install python-pbgenomicconsensus on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                python-pbgenomicconsensus
            
                    
    
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2. Uninstall "python-pbgenomicconsensus" package

In this section, we are going to explain the necessary steps to uninstall python-pbgenomicconsensus on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                python-pbgenomicconsensus
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the python-pbgenomicconsensus package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: python-pbgenomicconsensus
Priority: optional
Section: universe/python
Installed-Size: 247
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: all
Source: pbgenomicconsensus
Version: 2.0.0+20151210-1
Depends: python-h5py, python-numpy, python-pbcommand, python-pbconsensuscore, python-pbcore, python:any (<< 2.8), python:any (>= 2.7.5-5~)
Filename: pool/universe/p/pbgenomicconsensus/python-pbgenomicconsensus_2.0.0+20151210-1_all.deb
Size: 39592
MD5sum: 0287c080b980009e626c63c61314c767
SHA1: 191b4e5310c613b20eb6c49383289a969ad0423b
SHA256: 5c045069ecfafd4f00de7f07c8cc8ac2a930f653c9dd663febd63d23895d54f8
Description-en: Pacific Biosciences variant and consensus caller (Python 2)
The GenomicConsensus package provides Quiver, Pacific Biosciences'
flagship consensus and variant caller. Quiver is an algorithm that finds
the maximum likelihood template sequence given PacBio reads of the template.
These reads are modeled using a conditional random field approach that
prescribes a probability to a read given a template sequence. In addition to
the base sequence of each read, Quiver uses several additional quality value
covariates that the base caller provides.
.
This package is part of the SMRTAnalysis suite and provides the Python 2
backend library.
Description-md5: 505aaa61d67cf4a3eb5816b635984529
Homepage: https://github.com/PacificBiosciences/GenomicConsensus
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu