How to Install and Uninstall python-pyfaidx Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: November 25,2024

1. Install "python-pyfaidx" package

Please follow the instructions below to install python-pyfaidx on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                python-pyfaidx
            
                    
    
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2. Uninstall "python-pyfaidx" package

Here is a brief guide to show you how to uninstall python-pyfaidx on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                python-pyfaidx
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the python-pyfaidx package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: python-pyfaidx
Priority: optional
Section: universe/python
Installed-Size: 86
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: all
Version: 0.4.5.2-1
Depends: python-six, python:any (<< 2.8), python:any (>= 2.7.5-5~)
Filename: pool/universe/p/python-pyfaidx/python-pyfaidx_0.4.5.2-1_all.deb
Size: 18608
MD5sum: c8502c7485cbb2871f254794f191796d
SHA1: a8d8ae05096da1c9cdd4a031d088164c46da20b2
SHA256: cfc0229e7be0869155955312a93d9925e938b429a252c735516b3cc7c6abc96f
Description-en: efficient random access to fasta subsequences for Python
Samtools provides a function "faidx" (FAsta InDeX), which creates a
small flat index file ".fai" allowing for fast random access to any
subsequence in the indexed FASTA file, while loading a minimal amount of
the file in to memory. This Python module implements pure Python classes
for indexing, retrieval, and in-place modification of FASTA files using
a samtools compatible index. The pyfaidx module is API compatible with
the pygr seqdb module. A command-line script "faidx" is installed
alongside the pyfaidx module, and facilitates complex manipulation of
FASTA files without any programming knowledge.
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This package provides the Python 2 modules to access fasta files.
Description-md5: 4166cf4036658800d6919da799425f6e
Homepage: https://github.com/mdshw5/pyfaidx
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu