trinityrnaseq on AUR (Arch User Repository)

Last updated: May 06,2024

1. Install "trinityrnaseq" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
            $
        

        
            
                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
    Copied

b. Install trinityrnaseq on Arch using YAY


    
        
            $
        

        
            
                yay -S
            
                        
                trinityrnaseq
            
                    
    
    Copied

* (Optional) Uninstall trinityrnaseq on Arch using YAY


    
        
            $
        

        
            
                yay -Rns
            
                        
                trinityrnaseq
            
                    
    
    Copied

2. Manually Install "trinityrnaseq" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
            $
        

        
            
                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
    Copied

b. Clone trinityrnaseq's git locally


    
        
            $
        

        
            
                git clone https://aur.archlinux.org/trinityrnaseq.git 
            
                        
                ~/trinityrnaseq
            
                    
    
    Copied

c. Go to ~/trinityrnaseq folder and install it


   
    
        
            $
        

        
            
                cd
            
                        
                ~/trinityrnaseq
            
                    
    
    Copied

    

   
    
        
            $
        

        
            
                makepkg -si
            
                    
    
    Copied

3. Information about the trinityrnaseq package on Arch User Repository (AUR)

ID: 1409750
Name: trinityrnaseq
PackageBaseID: 202577
PackageBase: trinityrnaseq
Version: 2.15.1-1
Description: Transcriptome assembler for RNA-seq reads https://doi.org/10.1038%2Fnbt.1883
URL: https://github.com/Trinotate/Trinotate/wiki
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: malacology
Submitter: malacology
FirstSubmitted: 1708024434
LastModified: 1708025260
URLPath: /cgit/aur.git/snapshot/trinityrnaseq.tar.gz