How to Install and Uninstall trinityrnaseq Package on Debian 11 (Bullseye)

Last updated: November 22,2024

1. Install "trinityrnaseq" package

Please follow the guidelines below to install trinityrnaseq on Debian 11 (Bullseye)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                trinityrnaseq
            
                    
    
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2. Uninstall "trinityrnaseq" package

Here is a brief guide to show you how to uninstall trinityrnaseq on Debian 11 (Bullseye):


    
        
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                sudo apt remove
            
                        
                trinityrnaseq
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the trinityrnaseq package on Debian 11 (Bullseye)

Package: trinityrnaseq
Version: 2.11.0+dfsg-6
Installed-Size: 7229
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.27), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libhts3 (>= 1.10), libstdc++6 (>= 9), zlib1g (>= 1:1.1.4), perl:any, jaligner, libcommons-collections4-java, libgetopt-java, libjung-free-java, bowtie, bowtie2, libwww-perl, default-jre-headless, samtools, jellyfish, r-base-core, r-cran-cluster, r-bioc-qvalue, rsem, berkeley-express, trimmomatic, transdecoder, parafly, curl, salmon, python3-numpy, ncbi-blast+, python3, r-cran-readr, r-bioc-edger, r-bioc-deseq2, r-bioc-rots, r-cran-fastcluster, liburi-perl, r-cran-ape, r-bioc-ctc, r-cran-gplots, r-bioc-biobase, r-bioc-goseq, r-bioc-tximport, python3-htseq, rna-star, gmap, hisat2, subread, kallisto, python3-hisat2, r-cran-argparse, r-cran-goplot, r-bioc-dexseq
Recommends: trinityrnaseq-examples, r-cran-tidyverse, picard-tools, tabix
Suggests: collectl, r-bioc-tximportdata
Description: RNA-Seq De novo Assembly
Description-md5: 2ee7f38dbb99a040c33d6619f4f5668b
Homepage: https://trinityrnaseq.github.io/
Section: science
Priority: optional
Filename: pool/main/t/trinityrnaseq/trinityrnaseq_2.11.0+dfsg-6_amd64.deb
Size: 1661784
MD5sum: 6a94a9b66756205b19e4a9a02aaa3de2
SHA256: 0e88995ee2e7aa9fe019d02ccaef378526350a03de667265c2baabc405513ea6