How to Install and Uninstall tophat Package on Debian 10 (Buster)

Last updated: May 10,2024

1. Install "tophat" package

This guide let you learn how to install tophat on Debian 10 (Buster)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                tophat
            
                    
    
    Copied

2. Uninstall "tophat" package

This guide let you learn how to uninstall tophat on Debian 10 (Buster):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                tophat
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the tophat package on Debian 10 (Buster)

Package: tophat
Source: tophat (2.1.1+dfsg1-2)
Version: 2.1.1+dfsg1-2+b1
Installed-Size: 3832
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libboost-system1.67.0, libboost-thread1.67.0, libc6 (>= 2.15), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.3.3), python, bowtie2 | bowtie, samtools (>= 1.5)
Suggests: cufflinks
Description: fast splice junction mapper for RNA-Seq reads
Description-md5: 9cc01583a12c23af71b350c1cd8d209b
Homepage: http://ccb.jhu.edu/software/tophat
Section: science
Priority: optional
Filename: pool/main/t/tophat/tophat_2.1.1+dfsg1-2+b1_amd64.deb
Size: 669872
MD5sum: adde946fa648794705a681944a6b564c
SHA256: 1767bcd1e415a6878f59c9beadbbe38625c09a1510e7069548cbf370ccc8e9fb