How to Install and Uninstall libgatk-bwamem-java Package on Debian 12 (Bookworm)

Last updated: January 11,2025

You can also install and uninstall the libgatk-bwamem-java on the following distributions in the same way, as they are all based on the Debian system

MX Linux 23
SparkyLinux

1. Install "libgatk-bwamem-java" package

Please follow the guidelines below to install libgatk-bwamem-java on Debian 12 (Bookworm)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                libgatk-bwamem-java
            
                    
    
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2. Uninstall "libgatk-bwamem-java" package

This guide covers the steps necessary to uninstall libgatk-bwamem-java on Debian 12 (Bookworm):


    
        
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                sudo apt remove
            
                        
                libgatk-bwamem-java
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the libgatk-bwamem-java package on Debian 12 (Bookworm)

Package: libgatk-bwamem-java
Source: gatk-bwamem
Version: 1.0.4+dfsg2-2
Installed-Size: 47
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: libgatk-bwamem-jni (>= 1.0.4+dfsg2-2), libgatk-bwamem-jni (<< 1.0.4+dfsg2-2.1~)
Suggests: bwa
Description: interface to call Heng Li's bwa mem aligner from Java code
Description-md5: e5c4a65e1abec58ee9553c6440aaf48a
Homepage: https://github.com/broadinstitute/gatk-bwamem-jni/
Section: java
Priority: optional
Filename: pool/main/g/gatk-bwamem/libgatk-bwamem-java_1.0.4+dfsg2-2_all.deb
Size: 23380
MD5sum: 47104a343ecc1f8bc9cebbe1a04b2705
SHA256: f4f8b0ad48b807139f88deb6d0cacdf1a77a7028f641e00384cb0ba6afe4658e