How to Install and Uninstall libgatk-bwamem-java Package on Ubuntu 23.10 (Mantic Minotaur)

Last updated: December 29,2024

1. Install "libgatk-bwamem-java" package

This guide covers the steps necessary to install libgatk-bwamem-java on Ubuntu 23.10 (Mantic Minotaur)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                libgatk-bwamem-java
            
                    
    
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2. Uninstall "libgatk-bwamem-java" package

This guide let you learn how to uninstall libgatk-bwamem-java on Ubuntu 23.10 (Mantic Minotaur):


    
        
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                sudo apt remove
            
                        
                libgatk-bwamem-java
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the libgatk-bwamem-java package on Ubuntu 23.10 (Mantic Minotaur)

Package: libgatk-bwamem-java
Architecture: all
Version: 1.0.4+dfsg2-2
Priority: optional
Section: universe/java
Source: gatk-bwamem
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 47
Depends: libgatk-bwamem-jni (>= 1.0.4+dfsg2-2), libgatk-bwamem-jni (<< 1.0.4+dfsg2-2.1~)
Suggests: bwa
Filename: pool/universe/g/gatk-bwamem/libgatk-bwamem-java_1.0.4+dfsg2-2_all.deb
Size: 22934
MD5sum: 427b4d5fea2f8133fd8712493b86c0f5
SHA1: ba8bee1ebba220912a612f29752e10f498becc83
SHA256: a479ac78c694c609d71fc50b2abca886909f53b7baa2c0aa313394a2d4c001a6
SHA512: a76203394b927a5827f0ad88336b18c670734beb4018caa00788ed38ba3fd1599df315cb281aa2fe076f6a3fff1c2ed1563057e7ad3766951d9afc1324b9c9a2
Homepage: https://github.com/broadinstitute/gatk-bwamem-jni/
Description: interface to call Heng Li's bwa mem aligner from Java code
Description-md5: e5c4a65e1abec58ee9553c6440aaf48a