How to Install and Uninstall r-bioc-deseq2 Package on Debian 12 (Bookworm)

Last updated: November 07,2024

You can also install and uninstall the r-bioc-deseq2 on the following distributions in the same way, as they are all based on the Debian system

MX Linux 23
SparkyLinux

1. Install "r-bioc-deseq2" package

This guide covers the steps necessary to install r-bioc-deseq2 on Debian 12 (Bookworm)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-deseq2
            
                    
    
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2. Uninstall "r-bioc-deseq2" package

Please follow the guidance below to uninstall r-bioc-deseq2 on Debian 12 (Bookworm):


    
        
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                sudo apt remove
            
                        
                r-bioc-deseq2
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-deseq2 package on Debian 12 (Bookworm)

Package: r-bioc-deseq2
Version: 1.38.3+dfsg-1
Installed-Size: 1757
Maintainer: Debian R Packages Maintainers
Architecture: amd64
Depends: r-base-core (>= 4.2.2.20221110-2), r-api-4.0, r-api-bioc-3.16, r-bioc-s4vectors (>= 0.23.18), r-bioc-iranges, r-bioc-genomicranges, r-bioc-summarizedexperiment (>= 1.1.6), r-bioc-biocgenerics (>= 0.7.5), r-bioc-biobase, r-bioc-biocparallel, r-cran-matrixstats, r-cran-locfit, r-bioc-geneplotter, r-cran-ggplot2, r-cran-rcpp (>= 0.11.0), r-cran-rcpparmadillo, libblas3 | libblas.so.3, libc6 (>= 2.29), libgcc-s1 (>= 3.0), liblapack3 | liblapack.so.3, libstdc++6 (>= 9)
Suggests: r-cran-testthat, r-cran-knitr, r-cran-rmarkdown, r-cran-pheatmap, r-cran-rcolorbrewer, r-bioc-tximport, r-bioc-tximeta, r-bioc-tximportdata, r-cran-readr, r-cran-pbapply, r-bioc-glmgampoi, r-cran-biocmanager
Description: R package for RNA-Seq Differential Expression Analysis
Description-md5: ae9e1d3c5793b8ca7b76c769e1059db8
Homepage: https://bioconductor.org/packages/DESeq2/
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-deseq2/r-bioc-deseq2_1.38.3+dfsg-1_amd64.deb
Size: 1288432
MD5sum: ec0f1e896be076c33de0b9da3347c1d2
SHA256: 9c687ae10131001b589e8f9e5e4dd852e1a8ca148277c296c0cfc195b269dc4c