How to Install and Uninstall r-bioc-tcgabiolinks Package on Debian 12 (Bookworm)

Last updated: May 15,2024

You can also install and uninstall the r-bioc-tcgabiolinks on the following distributions in the same way, as they are all based on the Debian system

MX Linux 23
SparkyLinux

1. Install "r-bioc-tcgabiolinks" package

In this section, we are going to explain the necessary steps to install r-bioc-tcgabiolinks on Debian 12 (Bookworm)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                r-bioc-tcgabiolinks
            
                    
    
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2. Uninstall "r-bioc-tcgabiolinks" package

Please follow the step by step instructions below to uninstall r-bioc-tcgabiolinks on Debian 12 (Bookworm):


    
        
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                sudo apt remove
            
                        
                r-bioc-tcgabiolinks
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-tcgabiolinks package on Debian 12 (Bookworm)

Package: r-bioc-tcgabiolinks
Version: 2.25.3+dfsg-1
Installed-Size: 6791
Maintainer: Debian R Packages Maintainers
Architecture: all
Depends: r-base-core (>= 4.2.2.20221110-1), r-api-4.0, r-cran-downloader (>= 0.4), r-bioc-biomart, r-cran-dplyr, r-cran-tibble, r-bioc-genomicranges, r-cran-xml (>= 3.98.0), r-cran-data.table, r-cran-jsonlite (>= 1.0.0), r-cran-plyr, r-cran-knitr, r-cran-ggplot2, r-cran-stringr (>= 1.0.0), r-bioc-iranges, r-cran-rvest (>= 0.3.0), r-bioc-s4vectors, r-cran-r.utils, r-bioc-summarizedexperiment (>= 1.4.0), r-bioc-tcgabiolinksgui.data (>= 1.15.1), r-cran-readr, r-cran-tidyr, r-cran-purrr, r-cran-xml2, r-cran-httr (>= 1.2.1)
Suggests: r-cran-jpeg, r-cran-png, r-bioc-biocstyle, r-cran-rmarkdown, r-cran-devtools, r-cran-parmigene, r-bioc-biobase, r-bioc-affy, r-cran-testthat, r-bioc-annotationhub, r-bioc-experimenthub, r-cran-seurat, r-bioc-complexheatmap, r-cran-circlize, r-bioc-consensusclusterplus, r-cran-igraph, r-bioc-limma, r-bioc-edger, r-bioc-sva, r-bioc-edaseq, r-cran-survminer, r-bioc-genefilter, r-cran-gridextra, r-cran-survival, r-cran-doparallel, r-cran-ggrepel (>= 0.6.3), r-cran-scales
Description: GNU R/Bioconductor package for integrative analysis with GDC data
Description-md5: a12bea649d7df136b7f6898c8a08d8c7
Homepage: https://bioconductor.org/packages/TCGAbiolinks/
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-tcgabiolinks/r-bioc-tcgabiolinks_2.25.3+dfsg-1_all.deb
Size: 6506912
MD5sum: fa18841d85b6b6fef21e0b7c70f49572
SHA256: 7f749a95d7339a135097bf643b550f2ee0607e13c82d85740596fe3d7fff96a2