How to Install and Uninstall alien-hunter Package on Kali Linux

Last updated: November 06,2024

1. Install "alien-hunter" package

In this section, we are going to explain the necessary steps to install alien-hunter on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                alien-hunter
            
                    
    
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2. Uninstall "alien-hunter" package

This guide covers the steps necessary to uninstall alien-hunter on Kali Linux:


    
        
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                sudo apt remove
            
                        
                alien-hunter
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the alien-hunter package on Kali Linux

Package: alien-hunter
Version: 1.7-10
Installed-Size: 113
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: libbytecode-java, libbiojava-java (>= 1:1.9.5+dfsg), libcommons-cli-java, libcommons-collections3-java, libcommons-dbcp-java, libcommons-pool-java
Suggests: bioperl
Size: 28464
SHA256: 61a34a7960bf7e3809df2fcd69ef73762a6f5f1de659b09f1d10bad8dd35feb6
SHA1: fca40fb4b9b147e80c0432687989a520961d0c21
MD5sum: 2829f0a83c70e67177556194b7c49082
Description: Interpolated Variable Order Motifs to identify horizontally acquired DNA
Alien_hunter is an application for the prediction of putative
Horizontal Gene Transfer (HGT) events with the implementation of
Interpolated Variable Order Motifs (IVOMs). An IVOM approach
exploits compositional biases using variable order motif distributions
and captures more reliably the local composition of a sequence compared
to fixed-order methods. Optionally the predictions can be parsed into a
2-state 2nd order Hidden Markov Model (HMM), in a change-point detection
framework, to optimize the localization of the boundaries of the
predicted regions. The predictions (embl format) can be automatically
loaded into Artemis genome viewer freely available at:
http://www.sanger.ac.uk/Software/Artemis/.
Description-md5:
Homepage: https://www.sanger.ac.uk/science/tools/alien-hunter
Tag: field::biology, field::biology:structural, implemented-in::java,
implemented-in::perl, interface::commandline, role::program,
scope::utility, use::analysing
Section: science
Priority: optional
Filename: pool/main/a/alien-hunter/alien-hunter_1.7-10_all.deb