How to Install and Uninstall atac Package on Kali Linux

Last updated: May 17,2024

1. Install "atac" package

In this section, we are going to explain the necessary steps to install atac on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                atac
            
                    
    
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2. Uninstall "atac" package

In this section, we are going to explain the necessary steps to uninstall atac on Kali Linux:


    
        
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                sudo apt remove
            
                        
                atac
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the atac package on Kali Linux

Package: atac
Source: kmer (0~20150903+r2013-8)
Version: 0~20150903+r2013-8+b3
Installed-Size: 2713
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2), python3 (<< 3.12), python3 (>= 3.11~), python3.11, python3:any, perl:any, libfile-which-perl, leaff, meryl, gnuplot
Recommends: kmer-examples
Size: 378200
SHA256: 4604c0f9513b5732aab73c0dbee55f6dd6eeb85da91975adeaf288d8e5f370d6
SHA1: 3770e1751c23e16c0184d00adf1f3704d48b57a1
MD5sum: 5c88125e4a19bdb810a55f14530bcfa6
Description: genome assembly-to-assembly comparison
atac computes a one-to-one pairwise alignment of large DNA sequences. It first
finds the unique k-mers in each sequence, chains them to larger blocks, and
fills in spaces between blocks. It was written primarily to transfer
annotations between different assemblies of the human genome.
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The output is a set of ungapped 'matches', and a set of gapped 'runs' formed
from the matches. Each match or run associates one sequence with the other
sequence. The association is 'unique', in that there is no other (sizeable)
associations for either sequence. Thus, large repeats and duplications are not
present in the output - they appear as unmapped regions.
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Though the output is always pairwise, atac can cache intermediate results to
speed a comparisons of multiple sequences.
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This package is part of the Kmer suite.
Description-md5:
Homepage: http://kmer.sourceforge.net
Section: science
Priority: optional
Filename: pool/main/k/kmer/atac_0~20150903+r2013-8+b3_amd64.deb