How to Install and Uninstall bio-eagle Package on Kali Linux

Last updated: November 22,2024

1. Install "bio-eagle" package

Please follow the steps below to install bio-eagle on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                bio-eagle
            
                    
    
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2. Uninstall "bio-eagle" package

Please follow the steps below to uninstall bio-eagle on Kali Linux:


    
        
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                sudo apt remove
            
                        
                bio-eagle
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the bio-eagle package on Kali Linux

Package: bio-eagle
Source: bio-eagle (2.4.1-3)
Version: 2.4.1-3+b2
Installed-Size: 654
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libboost-iostreams1.83.0 (>= 1.83.0), libboost-program-options1.83.0 (>= 1.83.0), libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libhts3 (>= 1.17), libopenblas0, libstdc++6 (>= 13.1)
Recommends: med-config (>= 2.1)
Suggests: bio-eagle-examples
Size: 232820
SHA256: 62d79451b453f05bc967371a65fc562c9bc5f0fb485529c2ebda2eb8e0317376
SHA1: 01e41ce66b1994b2cecc3a30c5758aec02303699
MD5sum: b83854816fbd0c54d8801420c8acb402
Description: Haplotype phasing within a genotyped cohort or using a phased reference panel
Eagle estimates haplotype phase either within a genotyped cohort or using a
phased reference panel. The basic idea of the Eagle1 algorithm is to harness
identity-by-descent among distant relatives—which is pervasive at very large
sample sizes but rare among smaller numbers of samples—to rapidly call phase
using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a
full probabilistic model similar to the diploid Li-Stephens model used by
previous HMM-based methods.
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Please note: The executable was renamed to bio-eagle because of a name clash.
Please read more about this in /usr/share/doc/bio-eagle/README.Debian.
Description-md5:
Homepage: https://data.broadinstitute.org/alkesgroup/Eagle/
Tag: field::biology, field::biology:bioinformatics, implemented-in::c++,
interface::commandline, role::program, use::analysing
Section: science
Priority: optional
Filename: pool/main/b/bio-eagle/bio-eagle_2.4.1-3+b2_amd64.deb