How to Install and Uninstall kallisto-examples Package on Kali Linux

Last updated: May 15,2024

Deprecated! Installation of this package may no longer be supported.

1. Install "kallisto-examples" package

This guide let you learn how to install kallisto-examples on Kali Linux


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                kallisto-examples
            
                    
    
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2. Uninstall "kallisto-examples" package

Please follow the instructions below to uninstall kallisto-examples on Kali Linux:


    
        
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                sudo apt remove
            
                        
                kallisto-examples
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the kallisto-examples package on Kali Linux

Package: kallisto-examples
Source: kallisto
Version: 0.48.0+dfsg-4
Installed-Size: 1494
Maintainer: Debian Med Packaging Team
Architecture: all
Recommends: kallisto
Suggests: snakemake
Size: 1302540
SHA256: 376837ad47ed58027407d654d5121894f28c0187501b19a23d6464354877bf6a
SHA1: 9c88305128fec2795250f33e1af2b149ce40965d
MD5sum: 95f988414c9b1adfafbed0bab82ed408
Description: near-optimal RNA-Seq quantification (example data)
Kallisto is a program for quantifying abundances of transcripts from
RNA-Seq data, or more generally of target sequences using high-throughput
sequencing reads. It is based on the novel idea of pseudoalignment for
rapidly determining the compatibility of reads with targets, without the
need for alignment. On benchmarks with standard RNA-Seq data, kallisto
can quantify 30 million human reads in less than 3 minutes on a Mac
desktop computer using only the read sequences and a transcriptome index
that itself takes less than 10 minutes to build. Pseudoalignment of
reads preserves the key information needed for quantification, and
kallisto is therefore not only fast, but also as accurate than existing
quantification tools. In fact, because the pseudoalignment procedure is
robust to errors in the reads, in many benchmarks kallisto significantly
outperforms existing tools.
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This package contains usage examples which are used in autopkgtest.
Description-md5:
Multi-Arch: foreign
Homepage: https://pachterlab.github.io/kallisto
Section: science
Priority: optional
Filename: pool/main/k/kallisto/kallisto-examples_0.48.0+dfsg-4_all.deb