How to Install and Uninstall maffilter Package on Kali Linux

Last updated: December 24,2024

1. Install "maffilter" package

Please follow the guidance below to install maffilter on Kali Linux


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                maffilter
            
                    
    
    Copied

2. Uninstall "maffilter" package

Please follow the step by step instructions below to uninstall maffilter on Kali Linux:


    
        
            $
        

        
            
                sudo apt remove
            
                        
                maffilter
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the maffilter package on Kali Linux

Package: maffilter
Source: maffilter (1.3.1+dfsg-5)
Version: 1.3.1+dfsg-5+b1
Installed-Size: 1261
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libboost-iostreams1.83.0 (>= 1.83.0), libbpp-core4 (>= 2.4.1), libbpp-phyl-omics3 (>= 2.4.1), libbpp-phyl12 (>= 2.4.1), libbpp-seq-omics3 (>= 2.4.1), libbpp-seq12 (>= 2.4.1), libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1)
Suggests: maffilter-examples
Size: 258500
SHA256: ef2f4f563074eafedb8745e368ab9ec71a40542fd4819799610a770416d71249
SHA1: 7487ae348d8f8536ba88218228b9e2457e229d77
MD5sum: 8449340000f3fae38a7ca36a792facc2
Description: process genome alignment in the Multiple Alignment Format
MafFilter applies a series of "filters" to a MAF file, in order to
clean it, extract data and computer statistics while keeping track of
the associated meta-data such as genome coordinates and quality scores.
.
* It can process the alignment to remove low-quality / ambiguous /
masked regions.
* It can export data into a single or multiple alignment file in
format such as Fasta or Clustal.
* It can read annotation data in GFF or GTF format, and extract the
corresponding alignment.
* It can perform sliding windows calculations.
* It can reconstruct phylogeny/genealogy along the genome alignment.
* It can compute population genetics statistics, such as site
frequency spectrum, number of fixed/polymorphic sites, etc.
Description-md5:
Homepage: https://jydu.github.io/maffilter/
Section: science
Priority: optional
Filename: pool/main/m/maffilter/maffilter_1.3.1+dfsg-5+b1_amd64.deb