How to Install and Uninstall mira-assembler Package on Kali Linux

Last updated: November 22,2024

1. Install "mira-assembler" package

This tutorial shows how to install mira-assembler on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                mira-assembler
            
                    
    
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2. Uninstall "mira-assembler" package

This tutorial shows how to uninstall mira-assembler on Kali Linux:


    
        
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                sudo apt remove
            
                        
                mira-assembler
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the mira-assembler package on Kali Linux

Package: mira-assembler
Source: mira
Version: 4.9.6-11
Installed-Size: 7996
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libboost-filesystem1.83.0 (>= 1.83.0), libboost-thread1.83.0 (>= 1.83.0), libc6 (>= 2.34), libexpat1 (>= 2.0.1), libgcc-s1 (>= 3.0), libgomp1 (>= 4.9), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.6)
Recommends: mira-rfam-12s-rrna
Suggests: mira-doc
Size: 2567744
SHA256: 4d1a4b957761bc316d10e0648de3ce6a195277363af7bc6075668694925e8475
SHA1: f6550eceebc3ea547355b3fde5fd1a148ce53775
MD5sum: 27e9b5e7493d798aeda1d145a7e54dd4
Description: Whole Genome Shotgun and EST Sequence Assembler
The mira genome fragment assembler is a specialised assembler for
sequencing projects classified as 'hard' due to high number of similar
repeats. For expressed sequence tags (ESTs) transcripts, miraEST is
specialised on reconstructing pristine mRNA transcripts while
detecting and classifying single nucleotide polymorphisms (SNP)
occurring in different variations thereof.
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The assembler is routinely used for such various tasks as mutation
detection in different cell types, similarity analysis of transcripts
between organisms, and pristine assembly of sequences from various
sources for oligo design in clinical microarray experiments.
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The package provides the following executables:
Binaries provided:
* mira: for assembly of genome sequences
* miramem: estimating memory needed to assemble projects.
* mirabait: a "grep" like tool to select reads with kmers up to 256 bases.
* miraconvert: is a tool to convert, extract and sometimes recalculate all
kinds of data related to sequence assembly files.
Description-md5:
Homepage: https://sourceforge.net/p/mira-assembler/wiki/Home/
Tag: role::program
Section: science
Priority: optional
Filename: pool/main/m/mira/mira-assembler_4.9.6-11_amd64.deb