How to Install and Uninstall pirs Package on Kali Linux
Last updated: November 07,2024
1. Install "pirs" package
This tutorial shows how to install pirs on Kali Linux
$
sudo apt update
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$
sudo apt install
pirs
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2. Uninstall "pirs" package
This is a short guide on how to uninstall pirs on Kali Linux:
$
sudo apt remove
pirs
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$
sudo apt autoclean && sudo apt autoremove
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3. Information about the pirs package on Kali Linux
Package: pirs
Version: 2.0.2+dfsg-12
Installed-Size: 390
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 4.9), libgzstream0 (>= 1.5+dfsg), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.0.2), pirs-profiles, fonts-liberation, gnuplot-qt | gnuplot
Size: 119536
SHA256: 460c7604675b43ea39c636343930a1bfb76e3d150c90252adb17509c45d7ab86
SHA1: 30f5d44a52bcb2b60bd1528d89b0293ce2d53f65
MD5sum: 7c53a022518ccc48b44170050d121349
Description: Profile based Illumina pair-end Reads Simulator
The program pIRS can be used for simulating Illumina PE reads, with a
series of characters generated by Illumina sequencing platform, such as
insert size distribution, sequencing error(substitution, insertion,
deletion), quality score and GC content-coverage bias.
.
The insert size follows a normal distribution, so users should set the
mean value and standard deviation. Usually the standard deviation is set
as 1/20 of the mean value. The normal distribution by Box-Muller method
is simulated.
.
The program simulates sequencing error, quality score and GC content-
coverage bias according to the empirical distribution profile. Some
default profiles counted from lots of real sequencing data are provided.
.
To simulate reads from diploid genome, users should simulate the diploid
genome sequence firstly by setting the ratio of heterozygosis SNP,
heterozygosis InDel and structure variation.
Description-md5:
Homepage: https://github.com/galaxy001/pirs
Section: science
Priority: optional
Filename: pool/main/p/pirs/pirs_2.0.2+dfsg-12_amd64.deb
Version: 2.0.2+dfsg-12
Installed-Size: 390
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 4.9), libgzstream0 (>= 1.5+dfsg), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.0.2), pirs-profiles, fonts-liberation, gnuplot-qt | gnuplot
Size: 119536
SHA256: 460c7604675b43ea39c636343930a1bfb76e3d150c90252adb17509c45d7ab86
SHA1: 30f5d44a52bcb2b60bd1528d89b0293ce2d53f65
MD5sum: 7c53a022518ccc48b44170050d121349
Description: Profile based Illumina pair-end Reads Simulator
The program pIRS can be used for simulating Illumina PE reads, with a
series of characters generated by Illumina sequencing platform, such as
insert size distribution, sequencing error(substitution, insertion,
deletion), quality score and GC content-coverage bias.
.
The insert size follows a normal distribution, so users should set the
mean value and standard deviation. Usually the standard deviation is set
as 1/20 of the mean value. The normal distribution by Box-Muller method
is simulated.
.
The program simulates sequencing error, quality score and GC content-
coverage bias according to the empirical distribution profile. Some
default profiles counted from lots of real sequencing data are provided.
.
To simulate reads from diploid genome, users should simulate the diploid
genome sequence firstly by setting the ratio of heterozygosis SNP,
heterozygosis InDel and structure variation.
Description-md5:
Homepage: https://github.com/galaxy001/pirs
Section: science
Priority: optional
Filename: pool/main/p/pirs/pirs_2.0.2+dfsg-12_amd64.deb