How to Install and Uninstall pirs Package on Ubuntu 21.10 (Impish Indri)

Last updated: December 03,2024

1. Install "pirs" package

Here is a brief guide to show you how to install pirs on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                pirs
            
                    
    
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2. Uninstall "pirs" package

Learn how to uninstall pirs on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                pirs
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the pirs package on Ubuntu 21.10 (Impish Indri)

Package: pirs
Architecture: amd64
Version: 2.0.2+dfsg-9
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 396
Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgomp1 (>= 4.9), libgzstream0 (>= 1.5+dfsg), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.0.2), pirs-profiles, fonts-liberation, gnuplot
Filename: pool/universe/p/pirs/pirs_2.0.2+dfsg-9_amd64.deb
Size: 113168
MD5sum: 0ffb01a8756a1f3d0d032522ad5ff3cd
SHA1: 028f3b69416b98d93f86597a4ebdbd2bd61fba70
SHA256: 64366c7622ebaca1cbdf46d0cd82141a54483f91f86432057a4d174901b2bf12
SHA512: e2e7351267e90881e59fcdf9335470afca9efb74c92cdfe3192198a12b3c44a81a59822d582a6776b29aeb6a517d039dfc4dc5856d1561bff769bbea29bb90c4
Homepage: https://github.com/galaxy001/pirs
Description-en: Profile based Illumina pair-end Reads Simulator
The program pIRS can be used for simulating Illumina PE reads, with a
series of characters generated by Illumina sequencing platform, such as
insert size distribution, sequencing error(substitution, insertion,
deletion), quality score and GC content-coverage bias.
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The insert size follows a normal distribution, so users should set the
mean value and standard deviation. Usually the standard deviation is set
as 1/20 of the mean value. The normal distribution by Box-Muller method
is simulated.
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The program simulates sequencing error, quality score and GC content-
coverage bias according to the empirical distribution profile. Some
default profiles counted from lots of real sequencing data are provided.
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To simulate reads from diploid genome, users should simulate the diploid
genome sequence firstly by setting the ratio of heterozygosis SNP,
heterozygosis InDel and structure variation.
Description-md5: 3d84b3cc5542c152af8429c0a00353e8