How to Install and Uninstall python3-dna-jellyfish Package on Kali Linux

Last updated: November 10,2024

1. Install "python3-dna-jellyfish" package

Learn how to install python3-dna-jellyfish on Kali Linux


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                python3-dna-jellyfish
            
                    
    
    Copied

2. Uninstall "python3-dna-jellyfish" package

Please follow the guidance below to uninstall python3-dna-jellyfish on Kali Linux:


    
        
            $
        

        
            
                sudo apt remove
            
                        
                python3-dna-jellyfish
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the python3-dna-jellyfish package on Kali Linux

Package: python3-dna-jellyfish
Source: jellyfish (2.3.1-2)
Version: 2.3.1-2+b1
Installed-Size: 326
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: python3 (<< 3.13), python3 (>= 3.11~), python3:any, libc6 (>= 2.34), libgcc-s1 (>= 3.0), libjellyfish-2.0-2 (>= 2.3.1), libstdc++6 (>= 13.1)
Size: 66456
SHA256: 3875a577dd56731c4edec0d9d404abf28ba0f234cac5077e57a29c26c641df43
SHA1: 8e357f2bd497a62da5843e75230fbdb059e24b66
MD5sum: 40a86304895d9fe01c8324cfcc74a91c
Description: count k-mers in DNA sequences (Python bindings of jellyfish)
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in
DNA. A k-mer is a substring of length k, and counting the occurrences
of all such substrings is a central step in many analyses of DNA
sequence. JELLYFISH can count k-mers using an order of magnitude less
memory and an order of magnitude faster than other k-mer counting
packages by using an efficient encoding of a hash table and by
exploiting the "compare-and-swap" CPU instruction to increase
parallelism.
.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA
files containing DNA sequences. It outputs its k-mer counts in an
binary format, which can be translated into a human-readable text
format using the "jellyfish dump" command.
.
This package contains the Python bindings of jellyfish.
Description-md5:
Homepage: https://github.com/gmarcais/Jellyfish
Section: python
Priority: optional
Filename: pool/main/j/jellyfish/python3-dna-jellyfish_2.3.1-2+b1_amd64.deb