How to Install and Uninstall python3-dna-jellyfish Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 17,2024

1. Install "python3-dna-jellyfish" package

Please follow the guidelines below to install python3-dna-jellyfish on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                python3-dna-jellyfish
            
                    
    
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2. Uninstall "python3-dna-jellyfish" package

Learn how to uninstall python3-dna-jellyfish on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                python3-dna-jellyfish
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the python3-dna-jellyfish package on Ubuntu 21.10 (Impish Indri)

Package: python3-dna-jellyfish
Architecture: amd64
Version: 2.3.0-10
Priority: optional
Section: universe/python
Source: jellyfish
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 168
Depends: python3 (<< 3.10), python3 (>= 3.9~), python3:any, libc6 (>= 2.33), libgcc-s1 (>= 3.3.1), libjellyfish-2.0-2 (>= 2.3.0), libstdc++6 (>= 9)
Filename: pool/universe/j/jellyfish/python3-dna-jellyfish_2.3.0-10_amd64.deb
Size: 48908
MD5sum: 306f56fdef60ae60ce69e90a718b380c
SHA1: a774f5b4852b2fbd53315cb27f6062ccafb7f827
SHA256: c23614cc609aaf5cc927bc139d07ac3868521d9ab5bcde73063bd4754108d53c
SHA512: 1cde6fbbd318e23628c014117fcebabe411d02abe34ab8141dad6ff5012acb3e629572d1fbdd6df5a26ae540f1b0978a8497fde3a75d95423f0ee1f9e2fa17cc
Homepage: https://www.cbcb.umd.edu/software/jellyfish/
Description-en: count k-mers in DNA sequences (Python bindings of jellyfish)
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in
DNA. A k-mer is a substring of length k, and counting the occurrences
of all such substrings is a central step in many analyses of DNA
sequence. JELLYFISH can count k-mers using an order of magnitude less
memory and an order of magnitude faster than other k-mer counting
packages by using an efficient encoding of a hash table and by
exploiting the "compare-and-swap" CPU instruction to increase
parallelism.
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JELLYFISH is a command-line program that reads FASTA and multi-FASTA
files containing DNA sequences. It outputs its k-mer counts in an
binary format, which can be translated into a human-readable text
format using the "jellyfish dump" command.
.
This package contains the Python bindings of jellyfish.
Description-md5: c2eaea16b29e14b42b1c6e9b47551cd2